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Comp Structural Bioinfo

by: Ashleigh Dare

Comp Structural Bioinfo ECS 229

Ashleigh Dare
GPA 3.75


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Class Notes
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This 6 page Class Notes was uploaded by Ashleigh Dare on Tuesday September 8, 2015. The Class Notes belongs to ECS 229 at University of California - Davis taught by Staff in Fall. Since its upload, it has received 47 views. For similar materials see /class/191703/ecs-229-university-of-california-davis in Engineering Computer Science at University of California - Davis.

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Date Created: 09/08/15
Protein Structure Classification Why Classifying Standard in biology Aristotle Plants and Animal Linnaeus binomial system DanNin systematic classification that reveals phylogeny It is easier to think about a representative than to embrace the information of all individuals Protein Structure Classification Clustering Domain Definition 3 Major classifications SCOP CATH DDD Differences Clustering is a hard problem o O 2 clusters easy Q 0 O o O 0 0 0 O O O 0 O 4 clusters dif cult Q Many possibilities What is best clustering Hierarchical Clustering To cluster a set of data DP1 P2 PN hierarchical clustering proceeds through a series of partitions that runs from a single cluster containing all data points to N clusters each containing 1 data points Two forms of hierarchical clustering Agglomerative Divisive


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